{ "_id": "6a106652acfb0bcc41ca8e6a", "Package": "earlyR", "Title": "Estimation of Transmissibility in the Early Stages of a Disease\nOutbreak", "Version": "0.0.5", "Authors@R": "c(person(\"Thibaut\", \"Jombart\", email = \"thibautjombart@gmail.com\", role = c(\"aut\", \"cre\")),\nperson(\"Anne\", \"Cori\", email = \"a.cori@imperial.ac.uk\", role = c(\"aut\")),\nperson(\"Pierre\", \"Nouvellet\", email = \"p.nouvellet@imperial.ac.uk\", role = c(\"aut\")),\nperson(\"Janetta\", \"Skarp\", email = \"janetta.skarp13@imperial.ac.uk\", role = c(\"aut\")),\nperson(\"Zhian N.\", \"Kamvar\", email = \"zkamvar@gmail.com\", role = c(\"ctb\")),\nperson(\"Tim\", \"Taylor\", email = \"tim.taylor@hiddenelephants.co.uk\", role = c(\"ctb\"),\ncomment = c(ORCID = \"0000-0002-8587-7113\"))\n)", "Description": "Implements a simple, likelihood-based estimation of the\nreproduction number (R0) using a branching process with a\nPoisson likelihood. This model requires knowledge of the serial\ninterval distribution, and dates of symptom onsets.\nInfectiousness is determined by weighting R0 by the probability\nmass function of the serial interval on the corresponding day.\nIt is a simplified version of the model introduced by Cori et\nal. (2013) .", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "7.1.1", "URL": "https://www.repidemicsconsortium.org/earlyR/", "BugReports": "https://github.com/reconhub/earlyR/issues", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "libicu-dev libsodium-dev", "Repository": "https://reconhub.r-universe.dev", "Date/Publication": "2020-10-27 06:28:22 UTC", "RemoteUrl": "https://github.com/reconhub/earlyr", "RemoteRef": "HEAD", "RemoteSha": "61ee8bd091eee48909031c286586e7a0a2f17033", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-08 06:06:18 UTC", "User": "root" }, "Author": "Thibaut Jombart [aut, cre],\nAnne Cori [aut],\nPierre Nouvellet [aut],\nJanetta Skarp [aut],\nZhian N. 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