{ "_id": "6a4a0b45b9bf02698bd55b8e", "Package": "projections", "Title": "Project Future Case Incidence", "Version": "0.6.1", "Authors@R": "c(person(given = \"Thibaut\",\nfamily = \"Jombart\",\nrole = c(\"aut\", \"cre\"),\nemail = \"thibautjombart@gmail.com\"),\nperson(given = \"Pierre\",\nfamily = \"Nouvellet\",\nrole = \"aut\",\nemail = \"p.nouvellet@imperial.ac.uk\"),\nperson(given = \"Sangeeta\",\nfamily = \"Bhatia\",\nrole = \"ctb\",\nemail = \"sangeetabhatia03@gmail.com\"),\nperson(given = \"Zhian N.\",\nfamily = \"Kamvar\",\nrole = \"ctb\",\nemail = \"zkamvar@gmail.com\"),\nperson(given = \"Tim\",\nfamily = \"Taylor\",\nrole = \"ctb\",\nemail = \"tim.taylor@hiddenelephants.co.uk\"),\nperson(given = \"Stephane\",\nfamily = \"Ghozzi\",\nrole = \"ctb\",\nemail = \"stephane.ghozzi@mailbox.org\"))", "Description": "Provides functions and graphics for projecting daily\nincidence based on past incidence, and estimates of the serial\ninterval and reproduction number. Projections are based on a\nbranching process using a Poisson-distributed number of new\ncases per day, similar to the model used for estimating R in\n'EpiEstim' or in 'earlyR', and described by Nouvellet et al.\n(2017) . The package provides\nthe S3 class 'projections' which extends 'matrix', with\naccessors and additional helpers for handling, subsetting,\nmerging, or adding these objects, as well as dedicated printing\nand plotting methods.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "7.3.2", "Roxygen": "list(markdown = TRUE)", "URL": "https://www.repidemicsconsortium.org/projections/", "BugReports": "https://github.com/reconhub/projections/issues", "Config/testthat/edition": "3", "Repository": "https://reconhub.r-universe.dev", "Date/Publication": "2024-12-06 15:41:19 UTC", "RemoteUrl": "https://github.com/reconhub/projections", "RemoteRef": "HEAD", "RemoteSha": "1aff0e912ddaf3ae34d8879a35327b99f4b8d4af", "NeedsCompilation": "no", "Packaged": { "Date": "2026-07-05 07:41:09 UTC", "User": "root" }, "Author": "Thibaut Jombart [aut, cre],\nPierre Nouvellet [aut],\nSangeeta Bhatia [ctb],\nZhian N. Kamvar [ctb],\nTim Taylor [ctb],\nStephane Ghozzi [ctb]", "Maintainer": "Thibaut Jombart ", "_user": "reconhub", "_type": "src", "_file": "projections_0.6.1.tar.gz", "_fileid": "https://r2.ropensci.org/e5478009dd757ee92b2b4b6456b36ffa7bc59ad79523c124efaf5f443708039c", "_filesize": 1015212, "_sha256": "e5478009dd757ee92b2b4b6456b36ffa7bc59ad79523c124efaf5f443708039c", "_expires": "2026-10-13T07:44:04.000Z", "_created": "2026-07-05T07:41:09.000Z", "_published": "2026-07-05T07:44:05.798Z", "_jobs": [ { "job": 85203836512, "time": 135, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "8089616371" }, { "job": 85203836515, "time": 138, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "8089616761" }, { "job": 85203836501, "time": 83, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "8089609434" }, { "job": 85203836517, "time": 80, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "8089609309" }, { "job": 85203617872, "time": 193, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "8089598973" }, { "job": 85203836531, "time": 143, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "8089617378" }, { "job": 85203836549, "time": 78, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "8089608932" }, { "job": 85203836524, "time": 96, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "8089611792" }, { "job": 85203836532, "time": 84, "config": "windows-release", "r": "4.6.1", "check": "OK", "artifact": "8089609627" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/reconhub/actions/runs/28733578182", "_status": "success", "_upstream": "https://github.com/reconhub/projections", "_commit": { "id": "1aff0e912ddaf3ae34d8879a35327b99f4b8d4af", "author": "Thibaut Jombart ", "committer": "GitHub ", "message": "Merge pull request #42 from reconhub/issue_41\n\nhotfix for CRAN issues", "time": 1733499679 }, "_maintainer": { "name": "Thibaut Jombart", "email": "thibautjombart@gmail.com", "login": "thibautjombart", "description": "Senior Lecturer at Imperial College London. Consultant in outbreak analytics. R geek. Muay Thai enthusiast. Grindcore vocalist.", "uuid": 10757154 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "incidence", "version": ">= 1.4.1", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "testthat", "role": "Suggests" }, { "package": "roxygen2", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "outbreaks", "role": "Suggests" }, { "package": "magrittr", "role": "Suggests" }, { "package": "distcrete", "role": "Suggests" }, { "package": "svglite", "role": "Suggests" }, { "package": "EpiEstim", "role": "Suggests" } ], "_owner": "reconhub", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 14, "_contributors": [ { "user": "thibautjombart", "count": 216, 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projections objects", "topics": [ "as.data.frame.projections", "as.matrix.projections" ] }, { "page": "build_projections", "title": "Constructor for projections objects", "topics": [ "build_projections" ] }, { "page": "cumulate.projections", "title": "Compute cumulative projections", "topics": [ "cumulate.projections" ] }, { "page": "projections_accessors", "title": "Access content projections objects", "topics": [ "get_dates", "get_dates.projections" ] }, { "page": "merge_add_projections", "title": "Add data of different projections objects", "topics": [ "+.projections", "merge_add_projections" ] }, { "page": "merge_projections", "title": "Merge a list of projections objects", "topics": [ "merge_projections" ] }, { "page": "plot.projections", "title": "Plot projections objects", "topics": [ "add_projections", "plot.projections" ] }, { "page": "print.projections", "title": "Print method for projections objects", "topics": [ "print.projections" ] }, { "page": "project", "title": 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