Package: epiflows
Title: Predicting Disease Spread from Flow Data
Version: 0.2.2
Authors@R: c(person("Pawel", "Piatkowski", email = "pawel.piatkowski@posteo.net", role = c("aut", "cre"),
             comment = c(ORCID = "0000-0002-0822-5592")),
    person("Paula", "Moraga", email = "p.e.moraga-serrano@lancaster.ac.uk", role = "aut",
           comment = c(ORCID = "0000-0001-5266-0201")),
    person("Isobel", "Blake", email = "isobel.blake@imperial.ac.uk", role = c("ctb", "dtc")),
    person("Thibaut", "Jombart", email = "thibautjombart@gmail.com", role = "aut"),
    person("VP", "Nagraj", email = "vpnagraj@virginia.edu", role = "aut"),
    person("Zhian N.", "Kamvar", email = "zkamvar@gmail.com", role = "aut",
           comment = c(ORCID = "0000-0003-1458-7108")),
    person("Salla E.", "Toikkanen", email = "Salla.e.toikkanen@gmail.com", role = "aut"))
Description: Provides functions and classes designed to handle and
        visualise epidemiological flows between locations. Also
        contains a statistical method for predicting disease spread
        from flow data initially described in Dorigatti et al. (2017)
        <doi:10.2807/1560-7917.ES.2017.22.28.30572>. This package is
        part of the RECON (<https://www.repidemicsconsortium.org/>)
        toolkit for outbreak analysis.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: true
Depends: R (>= 4.0.0)
Imports: epicontacts, leaflet, ggmap, geosphere, ggplot2, tibble, sp,
        stats, htmltools, visNetwork
Suggests: testthat, roxygen2, knitr, outbreaks, vdiffr, curl, rmarkdown
RoxygenNote: 7.3.3
URL: https://www.repidemicsconsortium.org/epiflows/,
        https://github.com/reconhub/epiflows
BugReports: https://github.com/reconhub/epiflows/issues
VignetteBuilder: knitr
Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev
        libglpk-dev make libicu-dev libjpeg-dev libpng-dev libuv1-dev
        libxml2-dev libssl-dev libproj-dev libsqlite3-dev
        libudunits2-dev
Repository: https://reconhub.r-universe.dev
Date/Publication: 2026-03-09 08:17:53 UTC
RemoteUrl: https://github.com/reconhub/epiflows
RemoteRef: HEAD
RemoteSha: 79c8bc5f0dd794163bdd8679d5d9f462eba3e0e9
NeedsCompilation: no
Packaged: 2026-06-07 07:41:48 UTC; root
Author: Pawel Piatkowski [aut, cre] (ORCID:
    <https://orcid.org/0000-0002-0822-5592>),
  Paula Moraga [aut] (ORCID: <https://orcid.org/0000-0001-5266-0201>),
  Isobel Blake [ctb, dtc],
  Thibaut Jombart [aut],
  VP Nagraj [aut],
  Zhian N. Kamvar [aut] (ORCID: <https://orcid.org/0000-0003-1458-7108>),
  Salla E. Toikkanen [aut]
Maintainer: Pawel Piatkowski <pawel.piatkowski@posteo.net>